Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydrolase of the had superfamily | EDC56_3118 | Not Available | Negative | 3544435 - 3545106 | 26233.2 |
| adp-ribose diphosphatase | EDC56_3119 | Not Available | Positive | 3545271 - 3545825 | 20785.0 |
| hypothetical protein | EDC56_3120 | Not Available | Positive | 3545997 - 3546266 | 10715.0 |
| peroxiredoxin | EDC56_3121 | Not Available | Negative | 3546275 - 3546793 | 19068.9 |
| eama-like transporter family protein | EDC56_3122 | Not Available | Positive | 3546960 - 3547832 | 31808.0 |
| dna-binding csgd family transcriptional regulator | EDC56_3123 | Not Available | Negative | 3548056 - 3549219 | 42740.8 |
| Trna-phe | Not Available | Not Available | Positive | 3550254 - 3550329 | Not Available |
| fe-s cluster biosynthesis and repair protein yggx | EDC56_3125 | Not Available | Negative | 3550442 - 3550714 | 10393.5 |
| a/g-specific dna-adenine glycosylase | EDC56_3126 | Not Available | Negative | 3550793 - 3551878 | 40664.6 |
| uncharacterized protein involved in outer membrane biogenesis | EDC56_3127 | Not Available | Negative | 3551995 - 3554148 | 77400.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
