Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin-dependent dehydrogenase | EDC56_3108 | Not Available | Negative | 3535316 - 3536545 | 45497.0 |
| protein translocase subunit secb | EDC56_3109 | Not Available | Negative | 3536664 - 3537125 | 16983.2 |
| glutaredoxin 3 | EDC56_3110 | Not Available | Negative | 3537153 - 3537413 | 9628.52 |
| rhodanese-related sulfurtransferase | EDC56_3111 | Not Available | Negative | 3537417 - 3537833 | 15136.6 |
| phosphoglycerate mutase | EDC56_3112 | Not Available | Positive | 3538134 - 3539687 | 55956.8 |
| septal ring factor envc (amia/amib activator) | EDC56_3113 | Not Available | Positive | 3539695 - 3540813 | 42546.2 |
| carboxyl-terminal processing protease | EDC56_3114 | Not Available | Positive | 3540952 - 3542262 | 46786.6 |
| hypothetical protein | EDC56_3115 | Not Available | Positive | 3542268 - 3543128 | 31206.6 |
| cyclase | EDC56_3116 | Not Available | Negative | 3543123 - 3543896 | 27708.3 |
| ribosome-associated heat shock protein hsp15 | EDC56_3117 | Not Available | Negative | 3544026 - 3544433 | 15692.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
