Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydratase | EDC56_3098 | Not Available | Negative | 3522861 - 3524375 | 55543.7 |
| ribose-5-phosphate isomerase | EDC56_3099 | Not Available | Positive | 3524504 - 3525178 | 23903.6 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | EDC56_3100 | Not Available | Negative | 3525231 - 3525896 | 23810.5 |
| fad/fmn-containing dehydrogenase | EDC56_3101 | Not Available | Negative | 3525893 - 3527296 | 51905.9 |
| d-3-phosphoglycerate dehydrogenase | EDC56_3102 | Not Available | Positive | 3527448 - 3528677 | 43621.6 |
| thiamine biosynthesis protein thii | EDC56_3103 | Not Available | Negative | 3528749 - 3530194 | 54483.8 |
| glutamine synthetase | EDC56_3104 | Not Available | Positive | 3530555 - 3531964 | 50882.8 |
| two-component system nitrogen regulation sensor histidine kinase glnl | EDC56_3105 | Not Available | Positive | 3532285 - 3533352 | 39704.3 |
| fis family nitrogen metabolism transcriptional regulator ntrc | EDC56_3106 | Not Available | Positive | 3533349 - 3534770 | 53242.5 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | EDC56_3107 | Not Available | Negative | 3534767 - 3535270 | 18600.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
