Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transport protein exbb | EDC56_3076 | Not Available | Negative | 3501350 - 3501880 | 19472.0 |
| biopolymer transport protein exbb | EDC56_3077 | Not Available | Negative | 3501880 - 3503265 | 49505.6 |
| uncharacterized protein duf3450 | EDC56_3078 | Not Available | Negative | 3503267 - 3504049 | 29356.2 |
| dihydrofolate reductase | EDC56_3079 | Not Available | Negative | 3504399 - 3504908 | 18865.5 |
| thymidylate synthase | EDC56_3080 | Not Available | Negative | 3504943 - 3505737 | 30020.7 |
| phosphatidylglycerol:prolipoprotein diacylglycerol transferase | EDC56_3081 | Not Available | Negative | 3505813 - 3506625 | 30811.1 |
| hypothetical protein | EDC56_3082 | Not Available | Negative | 3506665 - 3507456 | 27493.6 |
| phosphotransferase system enzyme i (ptsp) | EDC56_3083 | Not Available | Negative | 3507557 - 3509869 | 85134.1 |
| putative (di)nucleoside polyphosphate hydrolase | EDC56_3084 | Not Available | Negative | 3509869 - 3510360 | 19043.9 |
| had superfamily hydrolase (tigr01490 family) | EDC56_3085 | Not Available | Positive | 3510593 - 3511249 | 24635.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
