Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | EDC56_3066 | Not Available | Negative | 3487295 - 3488224 | 34913.6 |
| glutamate-ammonia-ligase adenylyltransferase | EDC56_3067 | Not Available | Negative | 3488309 - 3491245 | 111282.0 |
| general secretion pathway protein e | EDC56_3068 | Not Available | Negative | 3491322 - 3493109 | 66005.6 |
| hypothetical protein | EDC56_3069 | Not Available | Positive | 3493316 - 3493993 | 25007.6 |
| pit family inorganic phosphate transporter | EDC56_3070 | Not Available | Positive | 3494012 - 3495289 | 43998.0 |
| n-acetylglutamate synthase | EDC56_3071 | Not Available | Positive | 3495454 - 3496794 | 49803.7 |
| dihydroxy-acid dehydratase | EDC56_3072 | Not Available | Positive | 3496917 - 3498761 | 65835.5 |
| tetratricopeptide repeat protein | EDC56_3073 | Not Available | Negative | 3498951 - 3500309 | 51749.4 |
| outer membrane transport energization protein tonb | EDC56_3074 | Not Available | Negative | 3500322 - 3500927 | 21937.3 |
| biopolymer transport protein exbd | EDC56_3075 | Not Available | Negative | 3500930 - 3501337 | 14901.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
