Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyltransferase-like protein | EDC56_3056 | Not Available | Positive | 3477559 - 3478101 | 20200.6 |
| hypothetical protein | EDC56_3057 | Not Available | Negative | 3478088 - 3479155 | 40454.6 |
| methyltransferase family protein | EDC56_3058 | Not Available | Negative | 3479158 - 3479865 | 27280.7 |
| glycosyltransferase involved in cell wall biosynthesis | EDC56_3059 | Not Available | Negative | 3479852 - 3481168 | 48691.8 |
| glycosyltransferase involved in cell wall biosynthesis | EDC56_3060 | Not Available | Negative | 3481340 - 3482443 | 41300.6 |
| heptose i phosphotransferase | EDC56_3061 | Not Available | Negative | 3482483 - 3483268 | 30135.6 |
| udp-glucose:(heptosyl)lps alpha-1,3-glucosyltransferase | EDC56_3062 | Not Available | Negative | 3483268 - 3484380 | 40249.4 |
| lipopolysaccharide kinase (kdo/waap) family protein | EDC56_3063 | Not Available | Negative | 3484377 - 3485123 | 28609.2 |
| heptosyltransferase-1 | EDC56_3064 | Not Available | Negative | 3485125 - 3486138 | 37659.9 |
| heptosyltransferase-2 | EDC56_3065 | Not Available | Negative | 3486143 - 3487186 | 37903.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
