Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_3046 | Not Available | Negative | 3466666 - 3467133 | 17759.2 |
| outer membrane protein | EDC56_3047 | Not Available | Positive | 3467302 - 3468687 | 50942.1 |
| 3-deoxy-d-manno-octulosonic-acid transferase | EDC56_3048 | Not Available | Negative | 3468757 - 3470031 | 48042.4 |
| glycerol-3-phosphate dehydrogenase | EDC56_3049 | Not Available | Positive | 3470145 - 3471374 | 44744.0 |
| aryl-alcohol dehydrogenase-like predicted oxidoreductase | EDC56_3050 | Not Available | Positive | 3471390 - 3472196 | 29570.4 |
| hypothetical protein | EDC56_3051 | Not Available | Positive | 3472197 - 3473087 | 33120.8 |
| glycosyl transferase family 2 | EDC56_3052 | Not Available | Positive | 3473096 - 3474088 | 37531.2 |
| o-antigen ligase | EDC56_3053 | Not Available | Negative | 3474085 - 3475278 | 44351.2 |
| d-alpha,beta-d-heptose 7-phosphate 1-kinase /d-beta-d-heptose 1-phosphate adenylyltransferase | EDC56_3054 | Not Available | Negative | 3475278 - 3476705 | 50623.1 |
| methyltransferase family protein | EDC56_3055 | Not Available | Positive | 3476892 - 3477509 | 22601.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
