Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosyl-trna synthetase | EDC56_3026 | Not Available | Negative | 3446383 - 3447690 | 47964.0 |
| murein dd-endopeptidase mepm/ murein hydrolase activator nlpd | EDC56_3027 | Not Available | Positive | 3447924 - 3449378 | 53364.1 |
| anhydro-n-acetylmuramic acid kinase | EDC56_3028 | Not Available | Positive | 3449371 - 3450495 | 41154.8 |
| hypothetical protein | EDC56_3029 | Not Available | Negative | 3450503 - 3450958 | 16869.5 |
| iron-sulfur cluster insertion protein | EDC56_3030 | Not Available | Negative | 3450968 - 3451324 | 12497.7 |
| cytoskeletal protein ccma (bactofilin family) | EDC56_3031 | Not Available | Negative | 3451437 - 3451868 | 14977.5 |
| hypothetical protein | EDC56_3032 | Not Available | Negative | 3451868 - 3452596 | 27938.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | EDC56_3033 | Not Available | Negative | 3452596 - 3453627 | 36653.1 |
| putative membrane protein | EDC56_3034 | Not Available | Positive | 3453839 - 3454258 | 16502.7 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | EDC56_3035 | Not Available | Positive | 3454392 - 3455186 | 29063.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
