Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine synthase a | EDC56_2975 | Not Available | Positive | 3400031 - 3400999 | 34029.6 |
| type iv pilus assembly protein pile | EDC56_2976 | Not Available | Negative | 3401063 - 3401467 | 14306.2 |
| type iv pilus assembly protein pily1 | EDC56_2977 | Not Available | Negative | 3401472 - 3405122 | 131835.0 |
| hypothetical protein | EDC56_2978 | Not Available | Negative | 3405139 - 3405525 | 14187.3 |
| hypothetical protein | EDC56_2979 | Not Available | Negative | 3405509 - 3405928 | 14981.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EDC56_2980 | Not Available | Negative | 3405981 - 3406745 | 27394.7 |
| type iv pilus modification protein pilv | EDC56_2981 | Not Available | Negative | 3406745 - 3407308 | 20004.1 |
| type iv fimbrial biogenesis protein fimt/type iv fimbrial biogenesis protein fimu | EDC56_2982 | Not Available | Positive | 3407561 - 3408073 | 17628.0 |
| Trna-leu | Not Available | Not Available | Positive | 3408268 - 3408352 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 3408395 - 3408469 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
