Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_2955 | Not Available | Negative | 3380516 - 3380800 | 10252.2 |
| hypothetical protein | EDC56_2956 | Not Available | Negative | 3380938 - 3381414 | 17747.0 |
| dna topoisomerase i | EDC56_2957 | Not Available | Negative | 3381525 - 3384185 | 99362.6 |
| uncharacterized protein duf1653 | EDC56_2958 | Not Available | Negative | 3384459 - 3384686 | 8603.19 |
| hypothetical protein | EDC56_2959 | Not Available | Negative | 3384700 - 3385176 | 18384.7 |
| universal stress protein a | EDC56_2960 | Not Available | Positive | 3385298 - 3385738 | 15706.6 |
| atp-binding cassette subfamily f protein uup | EDC56_2961 | Not Available | Negative | 3385739 - 3387631 | 70456.1 |
| soluble lytic murein transglycosylase | EDC56_2962 | Not Available | Positive | 3387746 - 3389767 | 77780.5 |
| hypothetical protein | EDC56_2963 | Not Available | Negative | 3389793 - 3390608 | 30381.1 |
| sec-independent protein translocase tatd | EDC56_2964 | Not Available | Positive | 3390706 - 3391512 | 30368.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
