Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+-transporting nadh:ubiquinone oxidoreductase subunit c | EDC56_2945 | Not Available | Negative | 3367967 - 3368758 | 28425.4 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit b | EDC56_2946 | Not Available | Negative | 3368745 - 3369974 | 44769.0 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit a | EDC56_2947 | Not Available | Negative | 3369974 - 3371314 | 47966.5 |
| glyceraldehyde 3-phosphate dehydrogenase | EDC56_2948 | Not Available | Negative | 3371543 - 3373006 | 53899.0 |
| transcription-repair coupling factor | EDC56_2949 | Not Available | Positive | 3373296 - 3376736 | 128907.0 |
| peptidoglycan-binding protein csiv | EDC56_2950 | Not Available | Positive | 3376811 - 3377713 | 33106.9 |
| mscs family membrane protein | EDC56_2951 | Not Available | Negative | 3377710 - 3378816 | 41853.5 |
| hypothetical protein | EDC56_2952 | Not Available | Positive | 3378995 - 3379303 | 11545.1 |
| sos-response transcriptional repressor lexa | EDC56_2953 | Not Available | Positive | 3379395 - 3380003 | 22302.1 |
| cell division inhibitor sula | EDC56_2954 | Not Available | Positive | 3380069 - 3380464 | 14628.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
