Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family two component transcriptional regulator | EDC56_2925 | Not Available | Negative | 3348522 - 3349175 | 23688.8 |
| udp-n-acetylmuramate dehydrogenase | EDC56_2926 | Not Available | Negative | 3349420 - 3350466 | 37998.5 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | EDC56_2927 | Not Available | Negative | 3350538 - 3351302 | 27852.3 |
| lipid-a-disaccharide kinase | EDC56_2928 | Not Available | Negative | 3351306 - 3352355 | 37605.3 |
| subfamily b atp-binding cassette protein msba | EDC56_2929 | Not Available | Negative | 3352360 - 3354177 | 67394.0 |
| biopolymer transport protein exbd | EDC56_2930 | Not Available | Negative | 3354213 - 3354623 | 14947.2 |
| biopolymer transport protein exbb | EDC56_2931 | Not Available | Negative | 3354632 - 3355267 | 22741.1 |
| competence protein comec | EDC56_2932 | Not Available | Negative | 3355390 - 3357702 | 85558.1 |
| hypothetical protein | EDC56_2933 | Not Available | Positive | 3357835 - 3358353 | 19815.0 |
| hypothetical protein | EDC56_2934 | Not Available | Positive | 3358480 - 3359346 | 31887.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
