Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | EDC56_2894 | Not Available | Negative | 3324626 - 3326029 | 51874.4 |
| deazaflavin-dependent oxidoreductase (nitroreductase family) | EDC56_2895 | Not Available | Negative | 3326122 - 3326604 | 18210.4 |
| dna-binding marr family transcriptional regulator | EDC56_2896 | Not Available | Positive | 3326822 - 3327235 | 15673.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EDC56_2897 | Not Available | Negative | 3327319 - 3328632 | 49931.5 |
| spoiiaa-like protein | EDC56_2898 | Not Available | Positive | 3328994 - 3329359 | 13614.6 |
| arac family transcriptional regulator | EDC56_2899 | Not Available | Negative | 3329449 - 3330219 | 29023.7 |
| putative mfs family arabinose efflux permease | EDC56_2900 | Not Available | Positive | 3330367 - 3331545 | 42152.2 |
| rof transcriptional antiterminator | EDC56_2901 | Not Available | Negative | 3331656 - 3331898 | 9259.12 |
| kynurenine formamidase | EDC56_2902 | Not Available | Positive | 3332256 - 3333155 | 32643.6 |
| hypothetical protein | EDC56_2903 | Not Available | Positive | 3333643 - 3334257 | 21793.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
