Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | EDC56_2884 | Not Available | Negative | 3315283 - 3315720 | 16957.7 |
| hypothetical protein | EDC56_2885 | Not Available | Negative | 3315740 - 3316708 | 35303.0 |
| putative dcc family thiol-disulfide oxidoreductase yuxk | EDC56_2886 | Not Available | Negative | 3316819 - 3317253 | 16355.0 |
| uncharacterized protein duf4166 | EDC56_2887 | Not Available | Negative | 3317250 - 3317798 | 20925.8 |
| dna-binding transcriptional regulator gbsr (marr family) | EDC56_2888 | Not Available | Negative | 3317848 - 3318390 | 20666.1 |
| dna-binding transcriptional lysr family regulator | EDC56_2889 | Not Available | Negative | 3318552 - 3319460 | 33781.6 |
| hypothetical protein | EDC56_2890 | Not Available | Positive | 3319635 - 3320498 | 31812.8 |
| hemoglobin | EDC56_2891 | Not Available | Positive | 3320579 - 3320995 | 15656.3 |
| glutathione s-transferase | EDC56_2892 | Not Available | Positive | 3320992 - 3321591 | 22246.8 |
| iron complex outermembrane receptor protein | EDC56_2893 | Not Available | Negative | 3321752 - 3324151 | 86762.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
