Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_2772 | Not Available | Negative | 3172582 - 3173505 | 34343.2 |
| eama-like transporter family protein | EDC56_2773 | Not Available | Negative | 3173773 - 3174681 | 33021.6 |
| dna-binding transcriptional lysr family regulator | EDC56_2774 | Not Available | Positive | 3174862 - 3175737 | 32885.6 |
| hypothetical protein | EDC56_2775 | Not Available | Positive | 3175838 - 3176323 | 17716.3 |
| putative membrane protein yccc | EDC56_2776 | Not Available | Positive | 3176629 - 3178758 | 80554.1 |
| outer membrane protein tolc | EDC56_2777 | Not Available | Positive | 3178765 - 3180408 | 61385.0 |
| uncharacterized protein duf1656 | EDC56_2778 | Not Available | Positive | 3180398 - 3180613 | 7965.97 |
| rnd family efflux transporter mfp subunit | EDC56_2779 | Not Available | Positive | 3180623 - 3181513 | 32902.6 |
| ion channel | EDC56_2780 | Not Available | Positive | 3181510 - 3182178 | 24798.5 |
| putative purr-regulated permease perm | EDC56_2781 | Not Available | Positive | 3182183 - 3183256 | 37781.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
