Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional lysr family regulator | EDC56_2762 | Not Available | Positive | 3157287 - 3158162 | 32351.9 |
| glutathione synthase | EDC56_2763 | Not Available | Positive | 3158547 - 3159593 | 39197.3 |
| uncharacterized protein (tigr02421 family) | EDC56_2764 | Not Available | Positive | 3159577 - 3161565 | 75191.5 |
| uncharacterized protein duf3465 | EDC56_2765 | Not Available | Positive | 3161769 - 3162218 | 16816.9 |
| nadph:quinone reductase-like zn-dependent oxidoreductase | EDC56_2766 | Not Available | Positive | 3162379 - 3163404 | 37569.5 |
| aaa domain-containing protein | EDC56_2767 | Not Available | Negative | 3163558 - 3168267 | 175300.0 |
| uncharacterized protein duf3127 | EDC56_2768 | Not Available | Negative | 3168506 - 3168937 | 15577.7 |
| choloylglycine hydrolase | EDC56_2769 | Not Available | Negative | 3169224 - 3170315 | 39495.1 |
| dimethylhistidine n-methyltransferase | EDC56_2770 | Not Available | Positive | 3170663 - 3171646 | 37031.9 |
| putative cold-shock dna-binding protein | EDC56_2771 | Not Available | Negative | 3171862 - 3172071 | 7454.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
