Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | EDC56_2752 | Not Available | Negative | 3147658 - 3148614 | 36312.4 |
| hypothetical protein | EDC56_2753 | Not Available | Negative | 3148616 - 3149614 | 36595.1 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | EDC56_2754 | Not Available | Negative | 3149602 - 3150840 | 45708.6 |
| udp-glucose 4-epimerase | EDC56_2755 | Not Available | Negative | 3150837 - 3151841 | 37217.1 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | EDC56_2756 | Not Available | Negative | 3151838 - 3152938 | 40255.5 |
| transferase family hexapeptide repeat protein | EDC56_2757 | Not Available | Negative | 3152931 - 3153419 | 17429.8 |
| putative dehydrogenase | EDC56_2758 | Not Available | Negative | 3153416 - 3154426 | 37842.5 |
| trna (adenine22-n1)-methyltransferase | EDC56_2759 | Not Available | Negative | 3154514 - 3155200 | 25629.2 |
| alcohol dehydrogenase class iv | EDC56_2760 | Not Available | Positive | 3155491 - 3156690 | 42743.0 |
| putative membrane protein | EDC56_2761 | Not Available | Negative | 3156726 - 3157145 | 16232.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
