Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl-gamma-aminobutyrate hydrolase | EDC56_2732 | Not Available | Negative | 3126814 - 3127581 | 27808.1 |
| xre family transcriptional regulator | EDC56_2733 | Not Available | Negative | 3127799 - 3128344 | 20096.5 |
| beta-alanine--pyruvate transaminase | EDC56_2734 | Not Available | Positive | 3128689 - 3130014 | 48142.6 |
| malonate-semialdehyde dehydrogenase (acetylating)/methylmalonate-semialdehyde dehydrogenase | EDC56_2735 | Not Available | Positive | 3130085 - 3131584 | 53365.1 |
| putative yhdh/yhfp family quinone oxidoreductase | EDC56_2736 | Not Available | Negative | 3131654 - 3132643 | 34111.3 |
| gamma-glutamyl aig2-like cyclotransferase | EDC56_2737 | Not Available | Negative | 3132842 - 3133285 | 16491.6 |
| uncharacterized protein duf3581 | EDC56_2738 | Not Available | Negative | 3133399 - 3134109 | 25903.2 |
| cys-trna(pro)/cys-trna(cys) deacylase | EDC56_2739 | Not Available | Negative | 3134200 - 3134664 | 16548.2 |
| hypothetical protein | EDC56_2740 | Not Available | Negative | 3134748 - 3135149 | 14226.9 |
| putative lipoprotein | EDC56_2741 | Not Available | Negative | 3135204 - 3136028 | 30133.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
