Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter mfp subunit | EDC56_0194 | Not Available | Negative | 217600 - 218841 | 44480.4 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | EDC56_0195 | Not Available | Negative | 218945 - 220342 | 52397.7 |
| f420-dependent oxidoreductase-like protein | EDC56_0196 | Not Available | Positive | 220699 - 221739 | 36772.3 |
| tryptophanyl-trna synthetase | EDC56_0197 | Not Available | Negative | 221862 - 222869 | 37482.8 |
| hypothetical protein | EDC56_0198 | Not Available | Negative | 223003 - 223128 | 4713.95 |
| serine transporter | EDC56_0199 | Not Available | Negative | 223170 - 224438 | 46303.1 |
| putative transcriptional regulator yheo | EDC56_0200 | Not Available | Positive | 225038 - 225691 | 24201.1 |
| glycosyl transferase family 1 | EDC56_0201 | Not Available | Negative | 225788 - 226867 | 41284.4 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | EDC56_0202 | Not Available | Positive | 227065 - 227856 | 27896.6 |
| branched-subunit amino acid transport protein | EDC56_0203 | Not Available | Negative | 227907 - 228251 | 12596.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
