Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur relay protein tusb/dsrh | EDC56_2712 | Not Available | Positive | 3105899 - 3106177 | 10050.0 |
| trna 2-thiouridine synthesizing protein e | EDC56_2713 | Not Available | Positive | 3106182 - 3106505 | 12011.5 |
| anthranilate phosphoribosyltransferase | EDC56_2714 | Not Available | Positive | 3106535 - 3107557 | 38394.9 |
| udp-glucose 4-epimerase | EDC56_2715 | Not Available | Negative | 3107619 - 3108632 | 36495.4 |
| trna (uracil-5-)-methyltransferase | EDC56_2716 | Not Available | Positive | 3108753 - 3109844 | 41592.9 |
| dutp pyrophosphatase | EDC56_2717 | Not Available | Negative | 3109847 - 3110290 | 15603.7 |
| hypothetical protein | EDC56_2718 | Not Available | Negative | 3110451 - 3111182 | 26815.2 |
| ribonucleoside-diphosphate reductase class ii | EDC56_2719 | Not Available | Negative | 3111293 - 3113440 | 80113.9 |
| hypothetical protein | EDC56_2720 | Not Available | Positive | 3114013 - 3114129 | 4177.21 |
| nadph2:quinone reductase | EDC56_2721 | Not Available | Negative | 3114156 - 3115133 | 34954.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
