Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | EDC56_2702 | Not Available | Negative | 3095172 - 3095837 | 24188.4 |
| 23s rrna pseudouridine955/2504/2580 synthase | EDC56_2703 | Not Available | Negative | 3095893 - 3096843 | 35152.0 |
| ribonuclease e | EDC56_2704 | Not Available | Positive | 3097418 - 3100402 | 107936.0 |
| nss family neurotransmitter:na+ symporter | EDC56_2705 | Not Available | Negative | 3100713 - 3102074 | 48063.9 |
| nss family neurotransmitter:na+ symporter | EDC56_2706 | Not Available | Negative | 3102256 - 3103620 | 48287.2 |
| Trna-ser | Not Available | Not Available | Positive | 3103859 - 3103949 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 3104106 - 3104196 | Not Available |
| modulator of ftsh protease | EDC56_2709 | Not Available | Positive | 3104396 - 3105064 | 23399.3 |
| trna 2-thiouridine synthesizing protein d | EDC56_2710 | Not Available | Positive | 3105140 - 3105532 | 14266.0 |
| trna 2-thiouridine synthesizing protein c | EDC56_2711 | Not Available | Positive | 3105538 - 3105897 | 13198.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
