Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative zn-binding protein involved in type vi secretion | EDC56_2682 | Not Available | Negative | 3078810 - 3079103 | 9320.78 |
| hypothetical protein | EDC56_2683 | Not Available | Negative | 3079123 - 3079692 | 20450.3 |
| type vi secretion system secreted protein vgrg | EDC56_2684 | Not Available | Negative | 3079714 - 3081651 | 71322.4 |
| type vi secretion system secreted protein hcp | EDC56_2685 | Not Available | Negative | 3081744 - 3082232 | 17276.5 |
| putative transposase | EDC56_2686 | Not Available | Negative | 3082414 - 3083115 | 26993.5 |
| tatd dnase family protein | EDC56_2687 | Not Available | Negative | 3083250 - 3084041 | 29631.5 |
| type iv pilus assembly protein pilz | EDC56_2688 | Not Available | Negative | 3084131 - 3084499 | 13110.9 |
| dna polymerase-3 subunit delta' | EDC56_2689 | Not Available | Negative | 3084590 - 3085555 | 35691.1 |
| dtmp kinase | EDC56_2690 | Not Available | Negative | 3085548 - 3086210 | 24558.5 |
| upf0755 protein | EDC56_2691 | Not Available | Negative | 3086213 - 3087247 | 39295.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
