Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impl | EDC56_2672 | Not Available | Positive | 3063639 - 3067103 | 130903.0 |
| type vi secretion system protein impm | EDC56_2673 | Not Available | Positive | 3067104 - 3067763 | 25050.3 |
| type vi secretion system protein impa | EDC56_2674 | Not Available | Positive | 3067823 - 3069088 | 47331.8 |
| type vi secretion system protein impb | EDC56_2675 | Not Available | Positive | 3069161 - 3069667 | 19213.5 |
| type vi secretion system protein impc | EDC56_2676 | Not Available | Positive | 3069667 - 3071157 | 55190.7 |
| type vi secretion system protein impd | EDC56_2677 | Not Available | Positive | 3071209 - 3072720 | 56630.1 |
| type vi secretion system protein impf | EDC56_2678 | Not Available | Positive | 3072723 - 3073199 | 18035.4 |
| type vi secretion system protein impg | EDC56_2679 | Not Available | Positive | 3073189 - 3075009 | 68113.4 |
| type vi secretion system protein imph | EDC56_2680 | Not Available | Positive | 3074973 - 3076064 | 41181.3 |
| type vi secretion system protein vasg | EDC56_2681 | Not Available | Positive | 3076115 - 3078754 | 96640.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
