Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase/3-hydroxybutyryl-coa epimerase/enoyl-coa isomerase | EDC56_2662 | Not Available | Negative | 3048527 - 3050686 | 77545.6 |
| beta-n-acetylglucosaminidase | EDC56_2663 | Not Available | Negative | 3050848 - 3051897 | 40109.9 |
| aminomethyltransferase | EDC56_2664 | Not Available | Negative | 3051931 - 3053043 | 39474.9 |
| atp-dependent helicase hrpb | EDC56_2665 | Not Available | Negative | 3053138 - 3055672 | 93183.7 |
| protein phosphatase | EDC56_2666 | Not Available | Positive | 3055743 - 3056561 | 30163.9 |
| serine/threonine protein kinase | EDC56_2667 | Not Available | Negative | 3056562 - 3059042 | 91347.5 |
| fha domain protein | EDC56_2668 | Not Available | Positive | 3059229 - 3060908 | 61303.7 |
| type vi secretion system protein vasd | EDC56_2669 | Not Available | Positive | 3060927 - 3061397 | 17709.3 |
| type vi secretion system protein impj | EDC56_2670 | Not Available | Positive | 3061433 - 3062767 | 49756.9 |
| type vi secretion system protein impk | EDC56_2671 | Not Available | Positive | 3062772 - 3063611 | 31344.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
