Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_2652 | Not Available | Negative | 3035365 - 3035895 | 20206.3 |
| d-3-phosphoglycerate dehydrogenase | EDC56_2653 | Not Available | Negative | 3035942 - 3037111 | 41843.5 |
| peptidyl-prolyl cis-trans isomerase d | EDC56_2654 | Not Available | Negative | 3037239 - 3039113 | 67536.8 |
| dna-binding protein hu-beta | EDC56_2655 | Not Available | Negative | 3039210 - 3039485 | 9475.44 |
| atp-dependent lon protease | EDC56_2656 | Not Available | Negative | 3039633 - 3042050 | 88749.2 |
| atp-dependent clp protease atp-binding subunit clpx | EDC56_2657 | Not Available | Negative | 3042184 - 3043476 | 47115.5 |
| atp-dependent clp protease protease subunit | EDC56_2658 | Not Available | Negative | 3043563 - 3044204 | 23296.8 |
| trigger factor | EDC56_2659 | Not Available | Negative | 3044332 - 3045645 | 47661.9 |
| hypothetical protein | EDC56_2660 | Not Available | Negative | 3045870 - 3047195 | 49140.5 |
| acetyl-coa acyltransferase | EDC56_2661 | Not Available | Negative | 3047330 - 3048508 | 41551.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
