Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase (b12-dependent) | EDC56_2642 | Not Available | Positive | 3022046 - 3025744 | 136214.0 |
| putative mate family efflux protein | EDC56_2643 | Not Available | Positive | 3025814 - 3027142 | 48206.2 |
| sulfite reductase (nadph) hemoprotein beta-component | EDC56_2644 | Not Available | Positive | 3027507 - 3029162 | 62184.4 |
| uncharacterized protein (duf934 family) | EDC56_2645 | Not Available | Positive | 3029155 - 3029646 | 18790.3 |
| transporter (cpa2 family) | EDC56_2646 | Not Available | Positive | 3029727 - 3030902 | 42741.1 |
| polyisoprenoid-binding protein ycei | EDC56_2647 | Not Available | Negative | 3030899 - 3031468 | 20648.3 |
| hypothetical protein | EDC56_2648 | Not Available | Negative | 3031500 - 3031616 | 4750.96 |
| electron transfer flavoprotein alpha subunit | EDC56_2649 | Not Available | Negative | 3031561 - 3032490 | 31395.1 |
| electron transfer flavoprotein beta subunit | EDC56_2650 | Not Available | Negative | 3032492 - 3033277 | 27906.2 |
| electron-transferring-flavoprotein dehydrogenase | EDC56_2651 | Not Available | Positive | 3033686 - 3035323 | 59593.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
