Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphatase | EDC56_2632 | Not Available | Positive | 3007608 - 3008162 | 20609.5 |
| 16s rrna (guanine1207-n2)-methyltransferase | EDC56_2633 | Not Available | Positive | 3008280 - 3009308 | 38091.6 |
| 23s rrna m(5)u-1939 methyltransferase | EDC56_2634 | Not Available | Negative | 3009335 - 3010699 | 50295.4 |
| pilin | EDC56_2635 | Not Available | Positive | 3010933 - 3011610 | 25488.0 |
| f420-dependent oxidoreductase-like protein | EDC56_2636 | Not Available | Negative | 3011674 - 3012690 | 37233.0 |
| atp-dependent exodnase (exonuclease v) beta subunit | EDC56_2637 | Not Available | Negative | 3012920 - 3016327 | 127283.0 |
| putative dna repair protein | EDC56_2638 | Not Available | Negative | 3016324 - 3019005 | 101270.0 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | EDC56_2639 | Not Available | Positive | 3019294 - 3020379 | 39524.2 |
| tetr family transcriptional regulator | EDC56_2640 | Not Available | Negative | 3020456 - 3021031 | 21231.7 |
| fe/s biogenesis protein nfua | EDC56_2641 | Not Available | Negative | 3021321 - 3021911 | 21618.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
