Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | EDC56_2622 | Not Available | Negative | 2996165 - 2997598 | 51907.2 |
| microcin c transport system permease protein | EDC56_2623 | Not Available | Positive | 2997789 - 2998811 | 37363.8 |
| microcin c transport system permease protein | EDC56_2624 | Not Available | Positive | 2998808 - 2999851 | 39022.9 |
| microcin c transport system substrate-binding protein | EDC56_2625 | Not Available | Positive | 2999855 - 3001714 | 71520.8 |
| peptide/nickel transport system atp-binding protein | EDC56_2626 | Not Available | Positive | 3001711 - 3002721 | 37087.6 |
| peptide/nickel transport system atp-binding protein | EDC56_2627 | Not Available | Positive | 3002718 - 3003731 | 37332.2 |
| bass family bile acid:na+ symporter | EDC56_2628 | Not Available | Positive | 3003799 - 3004686 | 31814.3 |
| 16s rrna (guanine1207-n2)-methyltransferase/23s rrna (guanine1835-n2)-methyltransferase | EDC56_2629 | Not Available | Positive | 3004832 - 3006055 | 45669.6 |
| protein-tyrosine phosphatase | EDC56_2630 | Not Available | Positive | 3006234 - 3006764 | 19498.2 |
| hypothetical protein | EDC56_2631 | Not Available | Positive | 3006999 - 3007349 | 12558.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
