Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein g | EDC56_2612 | Not Available | Negative | 2985751 - 2986197 | 15970.8 |
| serine protease sohb | EDC56_2613 | Not Available | Negative | 2986270 - 2987313 | 38313.5 |
| hypothetical protein | EDC56_2614 | Not Available | Negative | 2987341 - 2987997 | 24431.7 |
| hypothetical protein | EDC56_2615 | Not Available | Negative | 2987997 - 2989679 | 61623.4 |
| sodium/proton antiporter (nhab family) | EDC56_2616 | Not Available | Positive | 2989953 - 2991443 | 53984.3 |
| dna polymerase-3 subunit epsilon | EDC56_2617 | Not Available | Negative | 2991510 - 2992313 | 29946.6 |
| ribonuclease hi | EDC56_2618 | Not Available | Negative | 2992317 - 2992754 | 16299.4 |
| methyltransferase family protein | EDC56_2619 | Not Available | Negative | 2992774 - 2993586 | 30177.6 |
| hydroxyacylglutathione hydrolase | EDC56_2620 | Not Available | Positive | 2993749 - 2994516 | 28493.8 |
| membrane-bound lytic murein transglycosylase d | EDC56_2621 | Not Available | Positive | 2994591 - 2996162 | 59356.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
