Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylanthranilate isomerase | EDC56_2602 | Not Available | Negative | 2973910 - 2974551 | 22967.3 |
| trna pseudouridine38-40 synthase | EDC56_2603 | Not Available | Negative | 2974670 - 2975503 | 30995.0 |
| pilus assembly protein fimv | EDC56_2604 | Not Available | Negative | 2975511 - 2978699 | 114119.0 |
| aspartate-semialdehyde dehydrogenase | EDC56_2605 | Not Available | Negative | 2979054 - 2980169 | 40312.7 |
| 3-isopropylmalate dehydrogenase | EDC56_2606 | Not Available | Negative | 2980241 - 2981326 | 38570.6 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | EDC56_2607 | Not Available | Negative | 2981393 - 2982031 | 23884.4 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | EDC56_2608 | Not Available | Negative | 2982046 - 2983470 | 50519.7 |
| dna-binding transcriptional lysr family regulator | EDC56_2609 | Not Available | Positive | 2983653 - 2984531 | 32780.5 |
| molybdenum cofactor cytidylyltransferase | EDC56_2610 | Not Available | Negative | 2984506 - 2985132 | 22945.9 |
| hypothetical protein | EDC56_2611 | Not Available | Negative | 2985132 - 2985587 | 16125.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
