Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator/mocr family aminotransferase | EDC56_2582 | Not Available | Negative | 2949261 - 2951090 | 68504.8 |
| phosphate-selective porin o/p | EDC56_2583 | Not Available | Positive | 2951777 - 2952901 | 40116.1 |
| imelysin | EDC56_2584 | Not Available | Positive | 2952963 - 2954219 | 44944.6 |
| cxxc motif-containing protein (duf1111 family) | EDC56_2585 | Not Available | Positive | 2954332 - 2955744 | 51434.1 |
| hypothetical protein | EDC56_2586 | Not Available | Positive | 2955777 - 2956922 | 42624.7 |
| hypothetical protein | EDC56_2587 | Not Available | Positive | 2956925 - 2958061 | 41738.8 |
| ftsp/cota-like multicopper oxidase with cupredoxin domain | EDC56_2588 | Not Available | Positive | 2958116 - 2959495 | 50490.3 |
| dna-3-methyladenine glycosylase i | EDC56_2589 | Not Available | Positive | 2959585 - 2960154 | 21625.8 |
| lipoic acid synthetase | EDC56_2590 | Not Available | Negative | 2960224 - 2961225 | 36633.8 |
| transglutaminase superfamily protein | EDC56_2591 | Not Available | Negative | 2961446 - 2963476 | 76887.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
