Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t1ss-143 domain-containing protein | EDC56_2551 | Not Available | Negative | 2908379 - 2919007 | 375442.0 |
| zona occludens toxin (predicted atpase) | EDC56_2553 | Not Available | Negative | 2919660 - 2920823 | 42846.7 |
| uncharacterized protein duf2523 | EDC56_2554 | Not Available | Negative | 2920823 - 2921143 | 11835.8 |
| hypothetical protein | EDC56_2555 | Not Available | Negative | 2921152 - 2922462 | 46011.7 |
| hypothetical protein | EDC56_2556 | Not Available | Negative | 2922593 - 2922817 | 7283.16 |
| hypothetical protein | EDC56_2557 | Not Available | Negative | 2922841 - 2923005 | 5783.14 |
| hypothetical protein | EDC56_2558 | Not Available | Negative | 2923008 - 2923307 | 11073.2 |
| hypothetical protein | EDC56_2559 | Not Available | Negative | 2923323 - 2923601 | 10226.1 |
| ii/x family phage/plasmid replication protein | EDC56_2560 | Not Available | Negative | 2923611 - 2924852 | 47929.9 |
| helix-turn-helix protein | EDC56_2561 | Not Available | Positive | 2925023 - 2925382 | 13656.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
