Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_2541 | Not Available | Negative | 2888314 - 2888697 | 14435.2 |
| amino acid abc transporter substrate-binding protein (paat family) | EDC56_2542 | Not Available | Positive | 2888906 - 2889691 | 28563.0 |
| amino acid abc transporter membrane protein (paat family) | EDC56_2543 | Not Available | Positive | 2889693 - 2890358 | 24210.5 |
| amino acid abc transporter atp-binding protein (paat family) | EDC56_2544 | Not Available | Positive | 2890360 - 2891091 | 26757.4 |
| phosphate abc transporter substrate-binding protein (phot family) | EDC56_2545 | Not Available | Negative | 2891143 - 2892123 | 36276.5 |
| ompa family protein | EDC56_2546 | Not Available | Negative | 2892117 - 2892740 | 23327.6 |
| adhesin transport system outer membrane protein | EDC56_2547 | Not Available | Negative | 2892733 - 2894079 | 50758.5 |
| adhesin transport system membrane fusion protein | EDC56_2548 | Not Available | Negative | 2894103 - 2895422 | 48839.3 |
| atp-binding cassette subfamily b protein/atp-binding cassette subfamily c protein/atp-binding cassette subfamily c protein lapb | EDC56_2549 | Not Available | Negative | 2895423 - 2897552 | 78747.0 |
| t1ss-143 domain-containing protein | EDC56_2550 | Not Available | Negative | 2897552 - 2908174 | 376351.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
