Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system permease protein | EDC56_2530 | Not Available | Positive | 2874331 - 2875119 | 29316.3 |
| putative spermidine/putrescine transport system atp-binding protein | EDC56_2531 | Not Available | Positive | 2875116 - 2876135 | 37845.7 |
| had superfamily hydrolase (tigr01490 family) | EDC56_2532 | Not Available | Positive | 2876137 - 2876805 | 25033.1 |
| uncharacterized protein duf1837 | EDC56_2533 | Not Available | Positive | 2877183 - 2878013 | 31170.4 |
| helicase-like protein | EDC56_2534 | Not Available | Positive | 2878016 - 2881342 | 125099.0 |
| hypothetical protein | EDC56_2535 | Not Available | Positive | 2881786 - 2882316 | 20108.8 |
| integron integrase | EDC56_2537 | Not Available | Negative | 2882551 - 2883516 | 36935.9 |
| hypothetical protein | EDC56_2538 | Not Available | Positive | 2883784 - 2884296 | 19110.7 |
| hypothetical protein | EDC56_2539 | Not Available | Positive | 2884487 - 2887581 | 108797.0 |
| phop regulatory network protein yrbl | EDC56_2540 | Not Available | Positive | 2887704 - 2888306 | 23062.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
