Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi-like enzyme | EDC56_2509 | Not Available | Positive | 2855294 - 2855869 | 21187.2 |
| hypothetical protein | EDC56_2510 | Not Available | Negative | 2856000 - 2856416 | 15518.5 |
| hypothetical protein | EDC56_2511 | Not Available | Negative | 2856416 - 2856880 | 17551.2 |
| uncharacterized protein duf3592 | EDC56_2512 | Not Available | Positive | 2857050 - 2857547 | 18955.5 |
| uncharacterized protein duf3313 | EDC56_2513 | Not Available | Positive | 2857632 - 2858300 | 24704.6 |
| phosphate-selective porin opro/oprp | EDC56_2515 | Not Available | Positive | 2858940 - 2860052 | 40137.9 |
| phosphonate transport system substrate-binding protein | EDC56_2516 | Not Available | Positive | 2860201 - 2861049 | 30545.9 |
| phosphonate transport system atp-binding protein | EDC56_2517 | Not Available | Positive | 2861085 - 2861927 | 30887.5 |
| phosphonate transport system permease protein | EDC56_2518 | Not Available | Positive | 2861920 - 2862720 | 28810.2 |
| alcohol dehydrogenase | EDC56_2519 | Not Available | Positive | 2862791 - 2863918 | 40978.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
