Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EDC56_2489 | Not Available | Negative | 2833788 - 2834528 | 27149.1 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | EDC56_2490 | Not Available | Positive | 2834966 - 2836552 | 59082.4 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | EDC56_2491 | Not Available | Positive | 2836554 - 2837690 | 41510.9 |
| cyd operon protein ybgt | EDC56_2492 | Not Available | Positive | 2837703 - 2837813 | 4111.85 |
| atp-binding cassette subfamily c protein cydd | EDC56_2493 | Not Available | Positive | 2837817 - 2839499 | 62086.8 |
| atp-binding cassette subfamily c protein cydc | EDC56_2494 | Not Available | Positive | 2839496 - 2841160 | 60598.5 |
| putative protease | EDC56_2495 | Not Available | Negative | 2841155 - 2843398 | 83018.4 |
| glutathione s-transferase | EDC56_2496 | Not Available | Positive | 2843591 - 2844250 | 25368.5 |
| hypothetical protein | EDC56_2497 | Not Available | Positive | 2844551 - 2845036 | 17008.0 |
| hypothetical protein | EDC56_2498 | Not Available | Negative | 2845152 - 2845502 | 13038.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
