Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-o6-methylguanine--protein-cysteine s-methyltransferase /transcriptional regulator ada | EDC56_2469 | Not Available | Positive | 2779839 - 2780687 | 31481.8 |
| cytochrome c peroxidase | EDC56_2470 | Not Available | Positive | 2781148 - 2783778 | 95614.7 |
| hypothetical protein | EDC56_2471 | Not Available | Positive | 2784355 - 2786973 | 93909.4 |
| ompa family protein | EDC56_2472 | Not Available | Negative | 2787068 - 2787787 | 26496.1 |
| lysozyme | EDC56_2473 | Not Available | Positive | 2788130 - 2788558 | 16184.5 |
| rhtb (resistance to homoserine/threonine) family protein | EDC56_2474 | Not Available | Negative | 2788658 - 2789281 | 22287.8 |
| dna-binding transcriptional lysr family regulator | EDC56_2475 | Not Available | Positive | 2789388 - 2790299 | 33834.2 |
| hypothetical protein | EDC56_2476 | Not Available | Positive | 2790904 - 2791371 | 17570.4 |
| uncharacterized protein duf4402 | EDC56_2477 | Not Available | Positive | 2791602 - 2792066 | 15332.0 |
| hypothetical protein | EDC56_2478 | Not Available | Positive | 2792125 - 2792904 | 28949.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
