Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium chelatase family protein | EDC56_2459 | Not Available | Positive | 2768531 - 2770027 | 54174.5 |
| atp-dependent dna helicase rep | EDC56_2460 | Not Available | Positive | 2770140 - 2772161 | 76455.3 |
| dna-binding transcriptional lysr family regulator | EDC56_2461 | Not Available | Positive | 2772263 - 2773177 | 33951.5 |
| cyclic nucleotide-binding protein | EDC56_2462 | Not Available | Positive | 2773379 - 2774392 | 37257.1 |
| cytochrome c5 | EDC56_2463 | Not Available | Negative | 2774457 - 2774882 | 14574.4 |
| helix-turn-helix protein | EDC56_2464 | Not Available | Negative | 2775055 - 2775861 | 31557.2 |
| triacylglycerol lipase | EDC56_2465 | Not Available | Positive | 2776146 - 2777084 | 33734.1 |
| lipase chaperone limk | EDC56_2466 | Not Available | Positive | 2777086 - 2778096 | 38586.3 |
| Trna-arg | Not Available | Not Available | Positive | 2778203 - 2778279 | Not Available |
| cytochrome p450 pkss | EDC56_2468 | Not Available | Positive | 2778496 - 2779749 | 46977.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
