Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | EDC56_2449 | Not Available | Positive | 2760414 - 2761658 | 45238.1 |
| diaminopimelate epimerase | EDC56_2450 | Not Available | Positive | 2761674 - 2762504 | 30430.7 |
| hypothetical protein | EDC56_2451 | Not Available | Positive | 2762671 - 2763378 | 26073.8 |
| tyrosine recombinase xerc subunit | EDC56_2452 | Not Available | Positive | 2763388 - 2764365 | 36901.4 |
| putative hydrolase of the had superfamily | EDC56_2453 | Not Available | Positive | 2764402 - 2765121 | 27096.6 |
| hypothetical protein | EDC56_2454 | Not Available | Negative | 2765128 - 2765472 | 12318.4 |
| ammonium transporter | EDC56_2455 | Not Available | Negative | 2765753 - 2766988 | 42793.2 |
| nitrogen regulatory protein p-ii family | EDC56_2456 | Not Available | Negative | 2767100 - 2767438 | 12166.7 |
| hypothetical protein | EDC56_2457 | Not Available | Positive | 2767745 - 2768035 | 10698.2 |
| hypothetical protein | EDC56_2458 | Not Available | Positive | 2768180 - 2768419 | 8945.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
