Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | EDC56_2439 | Not Available | Negative | 2752090 - 2752842 | 27075.5 |
| hydroxymethylbilane synthase | EDC56_2440 | Not Available | Negative | 2752846 - 2753781 | 33725.7 |
| hypothetical protein | EDC56_2441 | Not Available | Positive | 2753805 - 2753954 | 5371.67 |
| lyttr family two component transcriptional regulator | EDC56_2442 | Not Available | Negative | 2753956 - 2754687 | 27393.3 |
| sensory transduction protein kinase algz | EDC56_2443 | Not Available | Negative | 2754722 - 2755768 | 39181.8 |
| argininosuccinate lyase | EDC56_2444 | Not Available | Positive | 2755913 - 2757307 | 51676.2 |
| protein-tyrosine phosphatase | EDC56_2445 | Not Available | Positive | 2757466 - 2758494 | 38736.4 |
| uncharacterized protein duf3187 | EDC56_2446 | Not Available | Negative | 2758479 - 2759504 | 36820.2 |
| cyay protein | EDC56_2447 | Not Available | Negative | 2759614 - 2759937 | 11592.6 |
| putative lipoprotein | EDC56_2448 | Not Available | Positive | 2760200 - 2760349 | 5176.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
