Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative murein hydrolase (tigr00659 family) | EDC56_2419 | Not Available | Negative | 2726579 - 2727289 | 24906.1 |
| holin-like protein | EDC56_2420 | Not Available | Negative | 2727282 - 2727638 | 12542.0 |
| disulfide bond formation protein dsbb | EDC56_2421 | Not Available | Negative | 2727665 - 2728174 | 18595.6 |
| glutamate-cysteine ligase | EDC56_2422 | Not Available | Negative | 2728298 - 2729893 | 60182.2 |
| hypothetical protein | EDC56_2423 | Not Available | Negative | 2730014 - 2730316 | 11302.7 |
| universal stress protein e | EDC56_2424 | Not Available | Positive | 2730576 - 2731379 | 30389.1 |
| d-tyrosyl-trna(tyr) deacylase | EDC56_2425 | Not Available | Negative | 2731736 - 2732176 | 15498.9 |
| proline iminopeptidase | EDC56_2426 | Not Available | Negative | 2732288 - 2733256 | 36422.7 |
| putative lipid-binding transport protein (tim44 family) | EDC56_2427 | Not Available | Negative | 2733731 - 2734627 | 32621.7 |
| gtp-binding protein | EDC56_2428 | Not Available | Negative | 2734785 - 2736599 | 66589.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
