Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 181013 - 181089 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 181103 - 181179 | Not Available |
| methylenetetrahydrofolate dehydrogenase (nadp+)/methenyltetrahydrofolate cyclohydrolase | EDC56_0166 | Not Available | Positive | 181507 - 182352 | 29570.0 |
| cysteinyl-trna synthetase | EDC56_0167 | Not Available | Negative | 182424 - 183827 | 52598.9 |
| glutaminyl-trna synthetase | EDC56_0168 | Not Available | Negative | 183893 - 185584 | 64103.8 |
| hypothetical protein | EDC56_0169 | Not Available | Negative | 185775 - 186221 | 16517.7 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | EDC56_0170 | Not Available | Positive | 186415 - 186915 | 17788.8 |
| udp-2,3-diacylglucosamine hydrolase | EDC56_0171 | Not Available | Positive | 186936 - 187655 | 27290.4 |
| hypothetical protein | EDC56_0172 | Not Available | Positive | 187949 - 188860 | 32403.7 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | EDC56_0173 | Not Available | Positive | 189049 - 190749 | 62108.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
