Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | EDC56_2409 | Not Available | Negative | 2716124 - 2717593 | 55158.5 |
| transcription termination factor rho | EDC56_2410 | Not Available | Negative | 2717697 - 2718959 | 47095.9 |
| thioredoxin | EDC56_2411 | Not Available | Negative | 2719201 - 2719527 | 11648.9 |
| ppx/gppa phosphatase family protein | EDC56_2412 | Not Available | Positive | 2719690 - 2720589 | 32886.3 |
| hypothetical protein | EDC56_2413 | Not Available | Negative | 2720602 - 2721171 | 20839.0 |
| atp-binding cassette subfamily f protein 3 | EDC56_2414 | Not Available | Negative | 2721233 - 2723191 | 72919.0 |
| uncharacterized protein (tigr02444 family) | EDC56_2415 | Not Available | Positive | 2723216 - 2723731 | 19728.7 |
| hypothetical protein | EDC56_2416 | Not Available | Negative | 2723724 - 2724623 | 32221.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa/fkbp-type peptidyl-prolyl cis-trans isomerase fklb | EDC56_2417 | Not Available | Positive | 2724966 - 2725703 | 25750.5 |
| regulator of sigma d | EDC56_2418 | Not Available | Negative | 2725779 - 2726276 | 18215.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
