Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain-containing protein | EDC56_2399 | Not Available | Negative | 2704807 - 2706246 | 52256.7 |
| 3-dehydroquinate synthase | EDC56_2400 | Not Available | Negative | 2706295 - 2707380 | 38770.0 |
| shikimate kinase | EDC56_2401 | Not Available | Negative | 2707417 - 2707926 | 18911.9 |
| type iv pilus assembly protein pilq | EDC56_2402 | Not Available | Negative | 2707939 - 2710032 | 76389.5 |
| type iv pilus assembly protein pilp | EDC56_2403 | Not Available | Negative | 2710046 - 2710570 | 19234.1 |
| type iv pilus assembly protein pilo | EDC56_2404 | Not Available | Negative | 2710583 - 2711185 | 22463.2 |
| type iv pilus assembly protein piln | EDC56_2405 | Not Available | Negative | 2711185 - 2711751 | 21548.8 |
| type iv pilus assembly protein pilm | EDC56_2406 | Not Available | Negative | 2711751 - 2712815 | 37800.1 |
| penicillin-binding protein 1a | EDC56_2407 | Not Available | Positive | 2712988 - 2715453 | 91030.7 |
| hypothetical protein | EDC56_2408 | Not Available | Positive | 2715440 - 2716108 | 24799.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
