Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ser/thr protein kinase rdoa (mazf antagonist) | EDC56_2389 | Not Available | Positive | 2690555 - 2691640 | 42605.9 |
| acetyltransferase-like isoleucine patch superfamily enzyme | EDC56_2390 | Not Available | Negative | 2692097 - 2692978 | 32676.3 |
| trna g46 methylase trmb | EDC56_2391 | Not Available | Positive | 2692982 - 2693671 | 26145.8 |
| serine o-acetyltransferase | EDC56_2392 | Not Available | Positive | 2693753 - 2694535 | 27760.5 |
| uroporphyrinogen decarboxylase | EDC56_2393 | Not Available | Negative | 2694559 - 2695626 | 39308.3 |
| hypothetical protein | EDC56_2394 | Not Available | Positive | 2695856 - 2696215 | 13479.6 |
| sodium/proline symporter | EDC56_2395 | Not Available | Negative | 2696452 - 2697981 | 53794.6 |
| uncharacterized membrane protein ysda (duf1294 family) | EDC56_2396 | Not Available | Negative | 2698129 - 2698509 | 14891.7 |
| glutamate synthase (nadph/nadh) small chain | EDC56_2397 | Not Available | Negative | 2698655 - 2700073 | 51841.6 |
| glutamate synthase (nadph/nadh) large chain | EDC56_2398 | Not Available | Negative | 2700160 - 2704593 | 161196.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
