Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase | EDC56_2379 | Not Available | Negative | 2680805 - 2681839 | 37433.3 |
| dethiobiotin synthetase | EDC56_2380 | Not Available | Negative | 2681964 - 2682659 | 24171.4 |
| malonyl-coa o-methyltransferase | EDC56_2381 | Not Available | Negative | 2682672 - 2684243 | 56729.9 |
| 8-amino-7-oxononanoate synthase | EDC56_2382 | Not Available | Negative | 2684236 - 2685435 | 42427.9 |
| biotin synthase | EDC56_2383 | Not Available | Negative | 2685444 - 2686544 | 40919.8 |
| comf family protein | EDC56_2384 | Not Available | Positive | 2686709 - 2687437 | 27459.1 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | EDC56_2385 | Not Available | Negative | 2687434 - 2687859 | 15249.4 |
| molybdate transport system substrate-binding protein | EDC56_2386 | Not Available | Positive | 2687990 - 2688742 | 27204.4 |
| molybdate transport system permease protein | EDC56_2387 | Not Available | Positive | 2688775 - 2689452 | 24554.8 |
| molybdate transport system atp-binding protein | EDC56_2388 | Not Available | Positive | 2689443 - 2690558 | 41239.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
