Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_2349 | Not Available | Positive | 2646814 - 2647518 | 25924.4 |
| hypothetical protein | EDC56_2350 | Not Available | Negative | 2647515 - 2648417 | 32200.7 |
| outer membrane usher protein fimd/papc | EDC56_2351 | Not Available | Negative | 2648420 - 2651215 | 101943.0 |
| hypothetical protein | EDC56_2352 | Not Available | Negative | 2651246 - 2651794 | 18777.1 |
| hypothetical protein | EDC56_2353 | Not Available | Negative | 2652267 - 2653208 | 34253.2 |
| hypothetical protein | EDC56_2354 | Not Available | Negative | 2653365 - 2653643 | 9811.7 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | EDC56_2355 | Not Available | Negative | 2653805 - 2654944 | 40350.6 |
| tetr family transcriptional regulator | EDC56_2356 | Not Available | Negative | 2655181 - 2656032 | 31876.8 |
| hypothetical protein | EDC56_2357 | Not Available | Positive | 2656142 - 2657308 | 43344.3 |
| putative ob-fold protein | EDC56_2358 | Not Available | Positive | 2657358 - 2658323 | 35918.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
