Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sortase a | EDC56_2329 | Not Available | Negative | 2626141 - 2626755 | 22687.5 |
| ca-activated chloride channel family protein | EDC56_2330 | Not Available | Negative | 2626757 - 2629144 | 87639.9 |
| two-component system ompr family response regulator | EDC56_2331 | Not Available | Positive | 2629354 - 2630043 | 25940.2 |
| dedicated sortase system histidine kinase | EDC56_2332 | Not Available | Positive | 2630080 - 2632146 | 78269.3 |
| peptidase m48-like protein | EDC56_2333 | Not Available | Negative | 2632042 - 2633196 | 41767.8 |
| uncharacterized membrane protein yjgn (duf898 family) | EDC56_2334 | Not Available | Negative | 2633199 - 2634251 | 38598.2 |
| hypothetical protein | EDC56_2335 | Not Available | Positive | 2634628 - 2634774 | 5638.22 |
| glutaredoxin | EDC56_2336 | Not Available | Negative | 2634807 - 2635163 | 13270.0 |
| putative dna-binding protein (mmcq/yjbr family) | EDC56_2337 | Not Available | Positive | 2635287 - 2635667 | 14539.7 |
| hypothetical protein | EDC56_2338 | Not Available | Positive | 2635779 - 2636210 | 16078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
