Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin-5'-phosphate synthase | EDC56_2319 | Not Available | Negative | 2616094 - 2616900 | 29611.2 |
| hypothetical protein | EDC56_2320 | Not Available | Negative | 2616977 - 2617384 | 15943.7 |
| hypothetical protein | EDC56_2321 | Not Available | Negative | 2617466 - 2617648 | 6784.57 |
| trka family protein | EDC56_2322 | Not Available | Positive | 2617732 - 2619534 | 64543.2 |
| eal domain-containing protein (putative c-di-gmp-specific phosphodiesterase class i) | EDC56_2323 | Not Available | Negative | 2619531 - 2620805 | 47552.7 |
| hypothetical protein | EDC56_2324 | Not Available | Positive | 2621212 - 2621421 | 7721.63 |
| adp-ribose pyrophosphatase yjhb (nudix family) | EDC56_2325 | Not Available | Positive | 2621469 - 2622059 | 22383.6 |
| hypothetical protein | EDC56_2326 | Not Available | Positive | 2622248 - 2622481 | 8565.23 |
| atp-dependent helicase hepa | EDC56_2327 | Not Available | Positive | 2622734 - 2625574 | 107044.0 |
| hypothetical protein | EDC56_2328 | Not Available | Negative | 2625667 - 2626071 | 15241.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
