Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | EDC56_0154 | Not Available | Negative | 174496 - 175581 | 40526.3 |
| trna pseudouridine65 synthase | EDC56_0155 | Not Available | Negative | 175641 - 176381 | 28436.6 |
| trna pseudouridine32 synthase/23s rrna pseudouridine746 synthase | EDC56_0156 | Not Available | Negative | 176381 - 177064 | 25216.6 |
| isoquinoline 1-oxidoreductase/isoquinoline 1-oxidoreductase beta subunit | EDC56_0157 | Not Available | Negative | 177164 - 179332 | 77951.0 |
| isoquinoline 1-oxidoreductase alpha subunit | EDC56_0158 | Not Available | Negative | 179329 - 179808 | 16764.1 |
| Trna-his | Not Available | Not Available | Positive | 180089 - 180164 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 180201 - 180277 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 180689 - 180765 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 180796 - 180872 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 180911 - 180986 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
